BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H06LP1|AL425941
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1564 0.0
>3x_Contig1786
Length = 33838
Score = 1564 bits (789), Expect = 0.0
Identities = 789/789 (100%)
Strand = Plus / Minus
Query: 1 gacagagtgttattgataagataattgtcacaaactctattccacaggacgaaacaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30751 gacagagtgttattgataagataattgtcacaaactctattccacaggacgaaacaatta 30692
Query: 61 aggtactaggtgctgatagagttgaggttctagatgtctctaatattttcgccgaagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30691 aggtactaggtgctgatagagttgaggttctagatgtctctaatattttcgccgaagcca 30632
Query: 121 tcagaagaattcataacggagaatcgataagtattctttttgaacatggatggtagtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30631 tcagaagaattcataacggagaatcgataagtattctttttgaacatggatggtagtaat 30572
Query: 181 cgtaccgaatttgtgattctgcttttaaggttgttttatgtaataaaaatataaatgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30571 cgtaccgaatttgtgattctgcttttaaggttgttttatgtaataaaaatataaatgtat 30512
Query: 241 atacacacacaaatgtatcaatttcaagttggtctcactctattgttctattgggccgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30511 atacacacacaaatgtatcaatttcaagttggtctcactctattgttctattgggccgtg 30452
Query: 301 caatggtgtaatgtcaatagcttgtaaaattcattcttacattggaagagtttctttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30451 caatggtgtaatgtcaatagcttgtaaaattcattcttacattggaagagtttctttgga 30392
Query: 361 tgatgatggtttccccagatttcttggtcttcatgcattaggccgaatttgaaaagaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30391 tgatgatggtttccccagatttcttggtcttcatgcattaggccgaatttgaaaagaata 30332
Query: 421 tgcacgacaaatgctacattgccctttatttgggaaataagttctaaagtctccaagcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30331 tgcacgacaaatgctacattgccctttatttgggaaataagttctaaagtctccaagcta 30272
Query: 481 ttgcgagagtgcatgatgttgtaccaaatgcttgggtatgattatgaatgaatgttaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30271 ttgcgagagtgcatgatgttgtaccaaatgcttgggtatgattatgaatgaatgttaaga 30212
Query: 541 ttgtttatggttatgatatggttcatgatgctgagatataggtgcaaagttttatcactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30211 ttgtttatggttatgatatggttcatgatgctgagatataggtgcaaagttttatcactc 30152
Query: 601 ttgtgtcgtattgtgatttaattctgctgctctccgttcgttagcctccttttctctctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30151 ttgtgtcgtattgtgatttaattctgctgctctccgttcgttagcctccttttctctctt 30092
Query: 661 ctcagtaagctcttttaattcgtcttccgtaattaaatgatgcttgtggttagttggtgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30091 ctcagtaagctcttttaattcgtcttccgtaattaaatgatgcttgtggttagttggtgg 30032
Query: 721 attgatcaattttccatcgttgtcaacttcgcaacaatgtatattttggaaccacgggtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30031 attgatcaattttccatcgttgtcaacttcgcaacaatgtatattttggaaccacgggtc 29972
Query: 781 cgctaaaac 789
|||||||||
Sbjct: 29971 cgctaaaac 29963
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6827
Number of Sequences: 1807
Number of extensions: 6827
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)